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MasterControl is a respected quality management system (QMS) used across regulated industries. Still, many teams discover that it can be rigid, complex, and costly once implementation begins.

When businesses compare MasterControl to its competitors, they want a platform that is easier to use, faster to deploy, and easier to maintain.

This article explains why companies look for alternatives and what common frustrations drive those decisions. You’ll also get a deep dive into the top alternatives to MasterControl.

What Is MasterControl?

MasterControl

Image source: mastercontrol.com

MasterControl is a digital quality management system that helps companies manage documents, audits, and compliance requirements.

It replaces paper-based processes with automation that connects quality, manufacturing, and document control within one centralized platform.

It’s widely used in regulated industries like medical devices, pharmaceuticals, and life sciences. The system helps teams ensure compliance with FDA, ISO, and GMP standards.

MasterControl Quality Excellence software uses automation and AI to simplify event tracking and risk management. It helps users edit and route forms, automate approvals, and manage changes with accuracy.

The system also provides version control, eSignatures, and audit trails to keep every record secure and traceable.

Why Are Users Exploring MasterControl Competitors?

Many teams start looking for MasterControl competitors when the system feels too rigid and complex. The software follows a fixed structure that limits how companies design and control their workflows.

Here are some of the common issues users encounter when using MasterControl:

  • Rigid structure: The platform enforces a fixed model that limits control and customization across workflows.
  • Slow implementation: Deployments take longer than expected and often require vendor assistance, which increases cost.
  • Outdated interface: Users describe the layout as clunky and slow, especially when multiple people access it at once.
  • Limited flexibility: Making changes often demands extra service fees or support tickets, which reduces agility.
  • Integration challenges: Connecting MasterControl with enterprise resource planning (ERP) tools or customer relationship management (CRM) systems takes time, and data migration can lead to errors.

These limitations drive companies to evaluate alternatives to MasterControl that deploy faster and run more easily.

Top 5 MasterControl Quality Excellence Alternatives

Several MasterControl alternatives give companies more control and faster deployment. Each solution focuses on different priorities within quality management, from flexibility to ease of use.

1. TLM

TLM Software

Total Lean Management (TLM) offers a full quality management system that supports both managers and daily users.

The main app helps teams build and update the QMS quickly. The companion web app lets single users handle reviews, approvals, and training from any device.

Together, they make everyday work easier while keeping records organized for ISO and FDA audits.

Key Features

  • Complete QMS modules, including audits, corrective and preventive action (CAPA), change control, document management, risk, metrics, and training
  • Build your own Custom Forms with email notification and approvals
  • AI-Powered compliance reviews and document content searching
  • Custom fields and system settings that adjust terminology and workflows to your company
  • Document management with version control, electronic signatures, and full audit trails
  • Training linked to job roles, procedures, and CAPA records
  • Risk management tools that follow ISO 31000 and ISO 14971
  • Reporting features with KPIs and trend data across all modules
  • A central dashboard that organizes task management for every user
  • Alerts and reminders to keep assignments on schedule
  • Support for multiple locations with user-specific records
  • On-site or hosted setup with multi-factor authentication (MFA)

Dual Application Setup

Upstream teams can handle the administrative side of quality management through the main app. They can rename fields, set options, and adjust workflows using custom fields and system settings.

Downstream users work through a clean web app that presents tasks and reminders in a simple list.

TLM’s dashboard keeps everyone focused on what’s next. Alerts and notifications guarantee nothing gets missed before an audit.

Deployment and Security

You can use TLM on-site or host it in the cloud. Both options function the same and can be moved later if your setup changes. Multi-factor authentication is built in for all logins.

Each company has its own MySQL database for better data protection. The software follows strict cybersecurity standards and policies.

Templates, Validation, and Support

TLM includes editable templates for ISO 9001, 13485, 17025, 16949, 27001, and 22000. Teams can modify and release them to speed up audit preparation.

Validation documents are available by module, helping medical device companies prepare for compliance faster.

The development team updates the system often, based on customer feedback. Support is responsive and reliable throughout setup and use.

Integrations

TLM connects to other systems through its Connection Manager tool. It links to QuickBooks and Zoho so teams can manage inspections, CAPA, and supplier work from one place.

This connection helps maintain traceability between production, purchasing, and quality activities. It also helps reduce repetitive data entry and keeps records consistent.

Who Benefits Most From Using TLM?

TLM is ideal for manufacturers that manage inspections, suppliers, and audits in one system. It’s also a great choice for companies that need document control, training, and risk tracking under regulated conditions.

See why TLM is the top choice among MasterControl alternatives. Book a demo to see how it helps your organizational processes!

2. Qualio

Qualio

Image source: qualio.com

Qualio is a quality and compliance platform for life science businesses. It serves pharmaceutical firms, medical device manufacturers, and biotech companies.

The software replaces paper-heavy systems with digital document management solutions that simplify compliance and record control.

It connects core quality processes like document control, training, change management, and risk tracking. The platform supports major regulatory standards, including FDA 21 CFR Part 11, ISO 13485, and ICH Q10.

Many organizations use Qualio to stay compliant, prepare for audits, and manage quality records in a single platform.

Key Features

  • Centralized document and record control
  • Audit-ready workflows for FDA and ISO standards
  • Risk and change management tools
  • Supplier control and traceability
  • Training and competency tracking
  • Customizable templates for procedures and forms
  • Scalable setup for companies of different sizes

Pros

Qualio has a user-friendly interface that helps teams adapt to digital quality management faster. Users can import existing documents and integrate them into structured workflows.

This setup helps teams stay organized and maintain operational efficiency.

Cons

Automation remains limited in some areas, such as document and design control. Tasks like version comparisons and change validation still need manual review.

Integration with ERP or CRM tools often requires custom configuration or developer assistance.

3. Veeva Vault QMS

Veeva Vault

Image source: veeva.com

Veeva Vault QMS is a cloud-based quality management system built for life science companies. It supports pharmaceutical, medical device, and biotech organizations that need strict regulatory compliance.

The software manages quality processes like deviations, CAPA, audits, change control, and supplier quality. It connects with other Veeva products such as RIM, Safety, and CTMS.

This setup lets teams share data across quality, regulatory, and study operations. It helps maintain accurate records and faster collaboration between departments.

Key Features

  • Prebuilt workflows for deviations, audits, and CAPA
  • Configurable forms and templates for custom processes
  • Risk management tools for research and development (R&D) and manufacturing teams
  • Secure document control with compliant audit trails
  • Automated notifications and task routing
  • Supplier and partner access for shared visibility
  • Integration with ERP, laboratory information management system (LIMS), manufacturing execution system (MES), and CRM
  • Dashboards for tracking quality performance and events

Pros

Veeva Vault QMS helps organizations stay compliant with complex regulations. Some users say its audit trails and workflows are helpful for documentation control and inspections. 

The platform supports scalability, making it useful for companies that operate across multiple regions.

Cons

The wide range of features makes the system harder to learn. New users often need time to understand its workflows and permissions. Some document actions are only available to record owners, which limits collaboration during reviews.

Uploading and updating files can take several steps, which slows task completion. Users also note that certain modules feel less intuitive than others.

4. Intellect

Intellect

Image source: intellect.com

Intellect QMS is an AI-powered QMS for manufacturers and life science organizations. It’s available as both cloud-based and on-premises software.

The platform helps companies maintain regulatory compliance and improve day-to-day performance across operations.

Its modular design lets businesses choose from multiple applications to match their setup. These modules can integrate with existing IT systems and support industry-specific standards, including ISO, FDA, and GxP.

This structure makes Intellect useful for teams in medical devices, pharmaceuticals, and other regulated fields.

Key Features

  • Cloud and on-premise deployment
  • AI-powered analytics and document management
  • Drag-and-drop app builder for workflow customization
  • Risk management and CAPA tracking
  • Full audit trails for compliance
  • Integration with ERP and CRM tools
  • Electronic signatures and automated notifications
  • Custom reports with scheduling options

Pros

A few users say Intellect easily adapts to company processes. The ability to configure apps through a no-code setup supports better engagement and faster onboarding.

AI tools like Data IQ™ and Search IQ™ improve reporting and document organization. Email alerts and scheduling help maintain task visibility.

Cons

Users mention that the no-code configuration takes time to learn. More complex setups might still need professional support to finish implementation. Performance can slow down when large files or encryption are involved.

Some users also describe occasional logout issues or page resets during navigation. Others note that not every feature can be adjusted for unique processes.

5. Greenlight Guru

Greenlight Guru

Image source: greenlight.guru

Greenlight Guru is a quality management system for medical device companies. It helps teams manage design controls, compliance, and product documentation across the entire lifecycle.

The system focuses on regulatory compliance, linking quality processes and design activities within a single digital workspace.

It also integrates with Jira, allowing engineering and quality teams to coordinate product development more effectively.

Used by organizations around the world, it helps maintain traceability and control across projects that need to meet strict FDA and ISO standards.

Key Features

  • Digital design history file management
  • Risk and compliance tracking for audits and CAPAs
  • Document and training management in one system
  • Supplier qualification and monitoring tools
  • Integration with Jira software for traceability
  • Audit trails and approval workflows
  • Clinical data collection and reporting
  • Secure, role-based access

Pros

Users find the platform intuitive and easy to navigate. The interface makes training management and documentation simpler for quality teams.

CAPA tracking and risk management tools are essential for companies managing regulatory audits and frequent product updates.

Cons

Customization options are limited compared to some competitors. Users mention that workspaces can behave inconsistently, with different save or text entry requirements.

Uploading legacy documents also takes time since the system lacks a bulk import option.

External users, such as suppliers, can’t sign or review documents without system access. Reporting tools are basic, and connecting audit findings to CAPA records can require manual effort.

Shared Strengths Among MasterControl Competitors

When companies look for alternatives to MasterControl, they usually want something easier to use, quicker to deploy, and more affordable.

Many platforms simplify compliance but limit customization. Others allow more control but take longer to learn and configure.

Some systems work well for specific industries, like life sciences, but don’t scale easily for broader applications. A few tools offer advanced automation, though they often require additional vendor help.

Overall, most teams seek a solution that balances performance, flexibility, and cost. They need software that’s intuitive enough for everyday users yet powerful enough for admins to manage quality and compliance.

Why TLM Leads Among MasterControl Alternatives

TLM Software

TLM addresses the common frustrations teams face when using MasterControl. Its dual-application setup separates daily users from administrators.

Downstream users complete tasks in a simple web app. Upstream admins manage audits, training, and document control in a full-featured system. 

This setup keeps work organized and easy to manage without limiting control.

TLM supports more industries than most competitors. It includes templates for ISO 16949, 27001, and 22000. 

That makes it ideal for manufacturers, service providers, and companies that follow multiple standards.

Integration is simple and reliable. The Connection Manager links TLM with ERP, accounting, and business tools like QuickBooks and Zoho. 

Teams can connect systems faster without hiring developers or relying on outside help.

Customization stands out as well. Users can modify fields, terms, and settings directly in the platform. It adapts to each company’s workflow easily.

The majority of users say they’re satisfied with how TLM supports their operations. 

If you’d like to explore it, start your free version trial and see how it keeps your quality systems organized and audit-ready!

FAQs About Mastercontrol Competitors

Is MasterControl an ERP system?

No. MasterControl isn’t an ERP system. It’s quality management software built to help regulated industries manage compliance, audits, and documentation.

Some companies integrate it with ERP tools to connect quality and production data, but it doesn’t replace an ERP.

What type of system is MasterControl?

MasterControl is a cloud-based quality management system. It helps companies in life sciences, manufacturing, and other regulated fields maintain compliance, manage risk, and control documents through a centralized platform.

Does the FDA use MasterControl?

Yes. The FDA’s Office of Regulatory Affairs adopted MasterControl in 2009 for field investigations and lab analysis. 

The Center for Drug Evaluation and Research began using it in 2015 to manage document control, CAPA, and audits.

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